src/PET/phantom_slice.md

changeset 51
429f8c86aea1
parent 49
56cc16c66b39
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/src/PET/phantom_slice.md	Fri May 03 17:17:16 2024 +0300
@@ -0,0 +1,16 @@
+# About the phantom slice
+
+The file `phantom_slice.mat` is generated from the file `phantom_atlas_density_cls.mat` of
+
+* Belzunce, M. A. (2018). High-Resolution Heterogeneous Digital PET [18F]FDG Brain Phantom based on the BigBrain Atlas (1.0) [Data set]. Zenodo. https://doi.org/10.5281/zenodo.1190598
+
+The following Matlab code does the extraction:
+
+```matlab
+load('phantom_atlas_density_cls.mat')
+fdgPhantom = phantom_atlas_density_cls.phantom;
+slice = 280;
+data = fdgPhantom(:,:,slice);
+imwrite(data, 'phantom_slice.png');
+save 'phantom_slice.mat' data;
+```

mercurial