Mercurial > repos > PredictPDPS / file comparison
comparison: src/PET/phantom_slice.md
src/PET/phantom_slice.md
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| 1 # About the phantom slice | |
| 2 | |
| 3 The file `phantom_slice.mat` is generated from the file `phantom_atlas_density_cls.mat` of | |
| 4 | |
| 5 * Belzunce, M. A. (2018). High-Resolution Heterogeneous Digital PET [18F]FDG Brain Phantom based on the BigBrain Atlas (1.0) [Data set]. Zenodo. https://doi.org/10.5281/zenodo.1190598 | |
| 6 | |
| 7 The following Matlab code does the extraction: | |
| 8 | |
| 9 ```matlab | |
| 10 load('phantom_atlas_density_cls.mat') | |
| 11 fdgPhantom = phantom_atlas_density_cls.phantom; | |
| 12 slice = 280; | |
| 13 data = fdgPhantom(:,:,slice); | |
| 14 imwrite(data, 'phantom_slice.png'); | |
| 15 save 'phantom_slice.mat' data; | |
| 16 ``` |
