Wed, 07 Dec 2022 06:54:56 +0200
arXiv links, README beautification
//! Plotting helper utilities use numeric_literals::replace_float_literals; use std::io::Write; use image::{ ImageFormat, ImageBuffer, Rgb }; use itertools::izip; use colorbrewer::Palette as CbPalette; use alg_tools::types::*; use alg_tools::lingrid::LinGrid; use alg_tools::mapping::RealMapping; use alg_tools::loc::Loc; use alg_tools::bisection_tree::Bounds; use alg_tools::maputil::map4; use alg_tools::tabledump::write_csv; use crate::measures::*; /// Default RGB ramp from [`colorbrewer`]. /// /// This is a tuple of parameters to [`colorbrewer::get_color_ramp`]. const RAMP : (CbPalette, u32) = (CbPalette::RdBu, 11); /// Helper trait for implementing dimension-dependent plotting routines. pub trait Plotting<const N : usize> { /// Plot several mappings and a discrete measure into a file. fn plot_into_file_spikes< F : Float, T1 : RealMapping<F, N>, T2 : RealMapping<F, N> > ( g_explanation : String, g : &T1, ω_explanation : String, ω : Option<&T2>, grid : LinGrid<F, N>, bnd : Option<Bounds<F>>, μ : &DiscreteMeasure<Loc<F, N>, F>, filename : String, ); /// Plot a mapping into a file, sampling values on a given grid. fn plot_into_file< F : Float, T1 : RealMapping<F, N>, > ( g : &T1, grid : LinGrid<F, N>, filename : String, explanation : String ); } /// Helper type for looking up a [`Plotting`] based on dimension. pub struct PlotLookup; impl Plotting<1> for PlotLookup { fn plot_into_file_spikes< F : Float, T1 : RealMapping<F, 1>, T2 : RealMapping<F, 1> > ( g_explanation : String, g : &T1, ω_explanation : String, ω0 : Option<&T2>, grid : LinGrid<F, 1>, bnd0 : Option<Bounds<F>>, μ : &DiscreteMeasure<Loc<F, 1>, F>, filename : String, ) { let start = grid.start[0].as_(); let end = grid.end[0].as_(); let m = μ.iter_masses().fold(F::ZERO, |m, α| m.max(α)); let s = μ.iter_masses().fold(F::ZERO, |m, α| m.add(α)); let mut spike_scale = F::ONE; let mut plotter = poloto::plot( "f", "x", format!("f(x); spike max={:.4}, n={}, ∑={:.4}", m, μ.len(), s) ).move_into(); if let Some(ω) = ω0 { let graph_ω = grid.into_iter().map(|x@Loc([x0]) : Loc<F, 1>| { [x0.as_(), ω.apply(&x).as_()] }); plotter.line(ω_explanation.as_str(), graph_ω.clone()); // let csv_f = format!("{}.txt", filename); // write_csv(graph_ω, csv_f).expect("CSV save error"); } let graph_g = grid.into_iter().map(|x@Loc([x0]) : Loc<F, 1>| { [x0.as_(), g.apply(&x).as_()] }); plotter.line(g_explanation.as_str(), graph_g.clone()); // let csv_f = format!("{}.txt", filename); // write_csv(graph_g, csv_f).expect("CSV save error"); bnd0.map(|bnd| { let upperb = bnd.upper().as_(); let lowerb = bnd.lower().as_(); let upper : [[f64; 2]; 2] = [[start, upperb], [end, upperb]]; let lower = [[start, lowerb], [end, lowerb]]; spike_scale *= bnd.upper(); plotter.line("upper bound", upper) .line("lower bound", lower) .ymarker(lowerb) .ymarker(upperb); }); for &DeltaMeasure{ α, x : Loc([x]) } in μ.iter_spikes() { let spike = [[x.as_(), 0.0], [x.as_(), (α/m * spike_scale).as_()]]; plotter.line("", spike); } let svg = format!("{}", poloto::disp(|a| poloto::simple_theme(a, plotter))); std::fs::File::create(filename + ".svg").and_then(|mut file| file.write_all(svg.as_bytes()) ).expect("SVG save error"); } fn plot_into_file< F : Float, T1 : RealMapping<F, 1>, > ( g : &T1, grid : LinGrid<F, 1>, filename : String, explanation : String ) { let graph_g = grid.into_iter().map(|x@Loc([x0]) : Loc<F, 1>| { [x0.as_(), g.apply(&x).as_()] }); let plotter: poloto::Plotter<'_, float, float> = poloto::plot("f", "x", "f(x)") .line(explanation.as_str(), graph_g.clone()) .move_into(); let svg = format!("{}", poloto::disp(|a| poloto::simple_theme(a, plotter))); let svg_f = format!("{}.svg", filename); std::fs::File::create(svg_f).and_then(|mut file| file.write_all(svg.as_bytes()) ).expect("SVG save error"); let csv_f = format!("{}.txt", filename); write_csv(graph_g, csv_f).expect("CSV save error"); } } /// Convert $[0, 1] ∈ F$ to $\\\{0, …, M\\\} ∈ F$ where $M=$`F::RANGE_MAX`. #[inline] fn scale_uint<F, U>(v : F) -> U where F : Float + CastFrom<U> + num_traits::cast::AsPrimitive<U>, U : Unsigned { (v*F::cast_from(U::RANGE_MAX)).as_() } /// Convert $[a, b] ∈ F$ to $\\\{0, …, M\\\} ∈ F$ where $M=$`F::RANGE_MAX`. #[replace_float_literals(F::cast_from(literal))] #[inline] fn scale_range_uint<F, U>(v : F, &Bounds(a, b) : &Bounds<F>) -> U where F : Float + CastFrom<U> + num_traits::cast::AsPrimitive<U>, U : Unsigned { debug_assert!(a < b); scale_uint(((v - a)/(b - a)).max(0.0).min(1.0)) } /// Sample a mapping on a grid. /// /// Returns a vector of values as well as upper and lower bounds of the values. fn rawdata_and_range<F, T>(grid : &LinGrid<F, 2>, g :&T) -> (Vec<F>, Bounds<F>) where F : Float, T : RealMapping<F, 2> { let rawdata : Vec<F> = grid.into_iter().map(|x| g.apply(&x)).collect(); let range = rawdata.iter() .map(|&v| Bounds(v, v)) .reduce(|b1, b2| b1.common(&b2)) .unwrap(); (rawdata, range) } /*fn to_range<'a, F, U>(rawdata : &'a Vec<F>, range : &'a Bounds<F>) -> std::iter::Map<std::slice::Iter<'a, F>, impl FnMut(&'a F) -> U> where F : Float + CastFrom<U> + num_traits::cast::AsPrimitive<U>, U : Unsigned { rawdata.iter().map(move |&v| scale_range_uint(v, range)) }*/ /// Convert a scalar value to an RGB triplet. /// /// Converts the value `v` supposed to be within the range `[a, b]` to an rgb value according /// to the given `ramp` of equally-spaced rgb interpolation points. #[replace_float_literals(F::cast_from(literal))] fn one_to_ramp<F, U>( &Bounds(a, b) : &Bounds<F>, ramp : &Vec<Loc<F, 3>>, v : F, ) -> Rgb<U> where F : Float + CastFrom<U> + num_traits::cast::AsPrimitive<U>, U : Unsigned { let n = ramp.len() - 1; let m = F::cast_from(U::RANGE_MAX); let ramprange = move |v : F| {let m : usize = v.as_(); m.min(n).max(0) }; let w = F::cast_from(n) * (v - a) / (b - a); // convert [0, 1] to [0, n] let (l, u) = (w.floor(), w.ceil()); // Find closest integers let (rl, ru) = (ramprange(l), ramprange(u)); let (cl, cu) = (ramp[rl], ramp[ru]); // Get corresponding colours let λ = match rl==ru { // Interpolation factor true => 0.0, false => (u - w) / (u - l), }; let Loc(rgb) = cl * λ + cu * (1.0 - λ); // Interpolate Rgb(rgb.map(|v| (v * m).round().min(m).max(0.0).as_())) } /// Convert a an iterator over scalar values to an iterator over RGB triplets. /// /// The conversion is that performed by [`one_to_ramp`]. #[replace_float_literals(F::cast_from(literal))] fn to_ramp<'a, F, U, I>( bounds : &'a Bounds<F>, ramp : &'a Vec<Loc<F, 3>>, iter : I, ) -> std::iter::Map<I, impl FnMut(F) -> Rgb<U> + 'a> where F : Float + CastFrom<U> + num_traits::cast::AsPrimitive<U>, U : Unsigned, I : Iterator<Item = F> + 'a { iter.map(move |v| one_to_ramp(bounds, ramp, v)) } /// Convert a [`colorbrewer`] sepcification to a ramp of rgb triplets. fn get_ramp<F : Float>((palette, nb) : (CbPalette, u32)) -> Vec<Loc<F, 3>> { let m = F::cast_from(u8::MAX); colorbrewer::get_color_ramp(palette, nb) .expect("Invalid colorbrewer ramp") .into_iter() .map(|rgb::RGB{r, g, b}| { [r, g, b].map(|c| F::cast_from(c) / m).into() }).collect() } /// Perform hue shifting of an RGB value. /// // The hue `ω` is in radians. #[replace_float_literals(F::cast_from(literal))] fn hueshift<F, U>(ω : F, Rgb([r_in, g_in, b_in]) : Rgb<U>) -> Rgb<U> where F : Float + CastFrom<U>, U : Unsigned { let m = F::cast_from(U::RANGE_MAX); let r = F::cast_from(r_in) / m; let g = F::cast_from(g_in) / m; let b = F::cast_from(b_in) / m; let u = ω.cos(); let w = ω.sin(); let nr = (0.299 + 0.701*u + 0.168*w) * r + (0.587 - 0.587*u + 0.330*w) * g + (0.114 - 0.114*u - 0.497*w) * b; let ng = (0.299 - 0.299*u - 0.328*w) * r + (0.587 + 0.413*u + 0.035*w) * g + (0.114 - 0.114*u + 0.292*w) *b; let nb = (0.299 - 0.3*u + 1.25*w) * r + (0.587 - 0.588*u - 1.05*w) * g + (0.114 + 0.886*u - 0.203*w) * b; Rgb([nr, ng, nb].map(scale_uint)) } impl Plotting<2> for PlotLookup { #[replace_float_literals(F::cast_from(literal))] fn plot_into_file_spikes< F : Float, T1 : RealMapping<F, 2>, T2 : RealMapping<F, 2> > ( _g_explanation : String, g : &T1, _ω_explanation : String, ω0 : Option<&T2>, grid : LinGrid<F, 2>, _bnd0 : Option<Bounds<F>>, μ : &DiscreteMeasure<Loc<F, 2>, F>, filename : String, ) { let [w, h] = grid.count; let (rawdata_g, range_g) = rawdata_and_range(&grid, g); let (rawdata_ω, range) = match ω0 { Some(ω) => { let (rawdata_ω, range_ω) = rawdata_and_range(&grid, ω); (rawdata_ω, range_g.common(&range_ω)) }, None => { let mut zeros = Vec::new(); zeros.resize(rawdata_g.len(), 0.0); (zeros, range_g) } }; let ramp = get_ramp(RAMP); let base_im_iter = to_ramp::<F, u16, _>(&range_g, &ramp, rawdata_g.iter().cloned()); let im_iter = izip!(base_im_iter, rawdata_g.iter(), rawdata_ω.iter()) .map(|(rgb, &v, &w)| { hueshift(2.0 * F::PI * (v - w).abs() / range.upper(), rgb) }); let mut img = ImageBuffer::new(w as u32, h as u32); img.pixels_mut() .zip(im_iter) .for_each(|(p, v)| *p = v); // Add spikes let m = μ.iter_masses().fold(F::ZERO, |m, α| m.max(α)); let μ_range = Bounds(F::ZERO, m); for &DeltaMeasure{ ref x, α } in μ.iter_spikes() { let [a, b] = map4(x, &grid.start, &grid.end, &grid.count, |&ξ, &a, &b, &n| { ((ξ-a)/(b-a)*F::cast_from(n)).as_() }); if a < w.as_() && b < h.as_() { let sc : u16 = scale_range_uint(α, &μ_range); // TODO: use max of points that map to this pixel. img[(a, b)] = Rgb([u16::MAX, u16::MAX, sc/2]); } } img.save_with_format(filename + ".png", ImageFormat::Png) .expect("Image save error"); } fn plot_into_file< F : Float, T1 : RealMapping<F, 2>, > ( g : &T1, grid : LinGrid<F, 2>, filename : String, _explanation : String ) { let [w, h] = grid.count; let (rawdata, range) = rawdata_and_range(&grid, g); let ramp = get_ramp(RAMP); let im_iter = to_ramp::<F, u16, _>(&range, &ramp, rawdata.iter().cloned()); let mut img = ImageBuffer::new(w as u32, h as u32); img.pixels_mut() .zip(im_iter) .for_each(|(p, v)| *p = v); img.save_with_format(filename.clone() + ".png", ImageFormat::Png) .expect("Image save error"); let csv_iter = grid.into_iter().zip(rawdata.iter()).map(|(Loc(x), &v)| (x, v)); let csv_f = filename + ".txt"; write_csv(csv_iter, csv_f).expect("CSV save error"); } } /// A helper structure for plotting a sequence of images. #[derive(Clone,Debug)] pub struct SeqPlotter<F : Float, const N : usize> { /// File name prefix prefix : String, /// Maximum number of plots to perform max_plots : usize, /// Sampling grid grid : LinGrid<F, N>, /// Current plot count plot_count : usize, } impl<F : Float, const N : usize> SeqPlotter<F, N> where PlotLookup : Plotting<N> { /// Creates a new sequence plotter instance pub fn new(prefix : String, max_plots : usize, grid : LinGrid<F, N>) -> Self { SeqPlotter { prefix, max_plots, grid, plot_count : 0 } } /// This calls [`PlotLookup::plot_into_file_spikes`] with a sequentially numbered file name. pub fn plot_spikes<T1, T2>( &mut self, g_explanation : String, g : &T1, ω_explanation : String, ω : Option<&T2>, tol : Option<Bounds<F>>, μ : &DiscreteMeasure<Loc<F, N>, F>, ) where T1 : RealMapping<F, N>, T2 : RealMapping<F, N> { if self.plot_count == 0 && self.max_plots > 0 { std::fs::create_dir_all(&self.prefix).expect("Unable to create plot directory"); } if self.plot_count < self.max_plots { PlotLookup::plot_into_file_spikes( g_explanation, g, ω_explanation, ω, self.grid, tol, μ, format!("{}out{:03}", self.prefix, self.plot_count) ); self.plot_count += 1; } } }