Thu, 25 Apr 2024 13:05:40 -0500
Reduce code duplication.
34
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
1 | __precompile__() |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
2 | |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
3 | module Stats |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
4 | |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
5 | |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
6 | ######################## |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
7 | # Load external modules |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
8 | ######################## |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
9 | |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
10 | using CSV, DataFrames |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
11 | using Statistics |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
12 | |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
13 | export calculate_statistics |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
14 | |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
15 | function calculate_statistics() |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
16 | ImName = ("lighthouse200x300", "shepplogan256x256", "brainphantom256x256") |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
17 | AlgName = ("dualscaling", "greedy","noprediction","primalonly","proximal","rotation","zerodual") |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
18 | mystart = 41 # Corresponds to the 500th iterate |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
19 | |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
20 | # Define an array to store results |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
21 | results = DataFrame(experiment = String[], α = Float64[], algorithm = String[], psnr_mean1 = Float64[], psnr_mean500 = Float64[], psnr_ci = String[], ssim_mean1 = Float64[], ssim_mean500 = Float64[], ssim_ci = String[]) |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
22 | |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
23 | for imname in ImName |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
24 | for algname in AlgName |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
25 | directory_path = "./img/" |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
26 | files = readdir(directory_path) |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
27 | filtered_files = filter(file -> startswith(file, "$(imname)_pdps_known_$(algname)") && endswith(file, ".txt"), files) |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
28 | |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
29 | for file in filtered_files |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
30 | filename = directory_path * file |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
31 | data = CSV.File(filename, delim='\t', header=2) |> DataFrame |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
32 | |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
33 | # Extract α from filename |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
34 | α, _, _ = extract_parameters(filename) |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
35 | |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
36 | |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
37 | # Extract SSIM and PSNR columns starting from 1st iteration |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
38 | ssim_values1 = Float64.(data[:, :ssim]) |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
39 | psnr_values1 = Float64.(data[:, :psnr]) |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
40 | |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
41 | # Extract SSIM and PSNR columns starting from 500th iteration |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
42 | ssim_values500 = Float64.(data[mystart:end, :ssim]) |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
43 | psnr_values500 = Float64.(data[mystart:end, :psnr]) |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
44 | |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
45 | # Calculate mean and confidence intervals |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
46 | ssim_mean1 = round(mean(ssim_values1), digits=4) |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
47 | psnr_mean1 = round(mean(psnr_values1), digits=4) |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
48 | |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
49 | ssim_mean500 = round(mean(ssim_values500), digits=4) |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
50 | psnr_mean500 = round(mean(psnr_values500), digits=4) |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
51 | ssim_std500 = round(std(ssim_values500), digits=4) |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
52 | psnr_std500 = round(std(psnr_values500), digits=4) |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
53 | n = length(ssim_values500) |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
54 | |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
55 | ssim_ci_lower = round(ssim_mean500 - 1.96 * ssim_std500 / sqrt(n), digits=4) |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
56 | ssim_ci_upper = round(ssim_mean500 + 1.96 * ssim_std500 / sqrt(n), digits=4) |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
57 | psnr_ci_lower = round(psnr_mean500 - 1.96 * psnr_std500 / sqrt(n), digits=4) |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
58 | psnr_ci_upper = round(psnr_mean500 + 1.96 * psnr_std500 / sqrt(n), digits=4) |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
59 | |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
60 | ssim_ci = "$(ssim_ci_lower) - $(ssim_ci_upper)" |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
61 | psnr_ci = "$(psnr_ci_lower) - $(psnr_ci_upper)" |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
62 | experiment = "$(imname)" |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
63 | algorithm = "$(algname)" |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
64 | |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
65 | # Append results to DataFrame |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
66 | push!(results, (experiment, α, algorithm, psnr_mean1, psnr_mean500, psnr_ci, ssim_mean1, ssim_mean500, ssim_ci)) |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
67 | end |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
68 | end |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
69 | end |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
70 | sort!(results, [:experiment, :α]) |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
71 | csv_path = "./img/summarystats.csv" |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
72 | if isfile(csv_path) |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
73 | rm(csv_path) |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
74 | end |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
75 | CSV.write(csv_path, results) |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
76 | end |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
77 | |
aca9c90f151c
Reduce dependencies; separate Stats from PlotResults (disabled by default to avoid heavy deps)
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff
changeset
|
78 | end |