src/PET/AlgorithmProximal.jl

Sun, 21 Apr 2024 19:26:50 +0300

author
Neil Dizon <neil.dizon@helsinki.fi>
date
Sun, 21 Apr 2024 19:26:50 +0300
changeset 22
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parent 13
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child 26
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permissions
-rw-r--r--

added stable interval for denoising

8
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1 ####################################################################
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2 # Predictive online PDPS for optical flow with known velocity field
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3 ####################################################################
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4
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5 __precompile__()
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6
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7 module AlgorithmProximal
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8
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9 identifier = "pdps_known_proximal"
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10
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11 using Printf
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12
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13 using AlgTools.Util
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14 import AlgTools.Iterate
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15 using ImageTools.Gradient
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16 using ImageTools.Translate
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17
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18 using ..Radon
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19 using ImageTransformations
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20 using Images, CoordinateTransformations, Rotations, OffsetArrays
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21 using ImageCore, Interpolations
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22
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23 using ..OpticalFlow: ImageSize,
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24 Image,
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25 petpdflow!
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26
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27 #########################
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28 # Iterate initialisation
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29 #########################
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30
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31 function init_rest(x::Image)
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32 imdim=size(x)
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33 y = zeros(2, imdim...)
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34 Δx = copy(x)
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35 Δy = copy(y)
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36 x̄ = copy(x)
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37 radonx = copy(x)
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38 return x, y, Δx, Δy, x̄, radonx
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39 end
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40
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41 function init_iterates(xinit::Image)
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42 return init_rest(copy(xinit))
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43 end
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44
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45 function init_iterates(dim::ImageSize)
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46 return init_rest(zeros(dim...))
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47 end
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48
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49 #########################
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50 # PETscan related
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51 #########################
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52 function petvalue(x, b, c)
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53 tmp = similar(b)
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54 radon!(tmp, x)
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55 return sum(@. tmp - b*log(tmp+c))
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56 end
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57
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58 function petgrad!(res, x, b, c, S)
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59 tmp = similar(b)
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60 radon!(tmp, x)
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61 @. tmp = S .- b/(tmp+c)
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62 backproject!(res, S.*tmp)
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63 end
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64
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65 function proj_nonneg!(y)
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66 @inbounds @simd for i=1:length(y)
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67 if y[i] < 0
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68 y[i] = 0
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69 end
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70 end
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71 return y
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72 end
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73
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74 ############
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75 # Algorithm
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76 ############
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77
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78 function step_lengths(params, γ, R_K², L)
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79 ρ̃₀, τ₀, σ₀, σ̃₀ = params.ρ̃₀, params.τ₀, params.σ₀, params.σ̃₀
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80 δ = params.δ
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81 ρ = isdefined(params, :phantom_ρ) ? params.phantom_ρ : params.ρ
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82 Λ = params.Λ
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83 Θ = params.dual_flow ? Λ : 1
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84
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85 τ = τ₀/L
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86 @assert(1+γ*τ ≥ Λ)
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87 σ = σ₀*min((1-τ₀)/(τ*R_K²), 1/max(0, τ*R_K²/((1+γ*τ-Λ)*(1-δ))-ρ))
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88 q = δ*(1+σ*ρ)/Θ
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89 if 1 ≥ q
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90 σ̃ = σ̃₀*σ/q
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91 #ρ̃ = ρ̃₀*max(0, ((Θ*σ)/(2*δ*σ̃^2*(1+σ*ρ))+1/(2σ)-1/σ̃))
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92 ρ̃ = max(0, (1-q)/(2*σ))
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93 else
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94 σ̃ = σ̃₀*σ/(q*(1-√(1-1/q)))
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95 ρ̃ = 0
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96 end
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97
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98 return τ, σ, σ̃, ρ̃
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99 end
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100
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101 function solve( :: Type{DisplacementT};
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102 dim :: ImageSize,
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103 iterate = AlgTools.simple_iterate,
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104 params::NamedTuple) where DisplacementT
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105
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106 ################################
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107 # Extract and set up parameters
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108 ################################
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109 α, ρ = params.α, params.ρ
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110 R_K² = ∇₂_norm₂₂_est²
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111 γ = 1
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112 L = params.L
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113 τ, σ, σ̃, ρ̃ = step_lengths(params, γ, R_K², L)
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114 println("Step length parameters: τ=$(τ), σ=$(σ), σ̃=$(σ̃), ρ̃=$(ρ̃)")
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115
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116 λ = params.λ
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117 c = params.c*ones(params.radondims...)
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118
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119
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120
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121 ######################
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122 # Initialise iterates
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123 ######################
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124
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125 x, y, Δx, Δy, x̄, r∇ = init_iterates(dim)
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126
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127 if params.L_experiment
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128 oldpetgradx = zeros(size(x)...)
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129 petgradx = zeros(size(x))
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130 oldx = ones(size(x))
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131 end
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132
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133 ####################
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134 # Run the algorithm
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135 ####################
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136
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137 v = iterate(params) do verbose :: Function,
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138 b :: Image, # noisy_sinogram
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139 v_known :: DisplacementT,
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140 theta_known :: DisplacementT,
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141 b_true :: Image,
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142 S :: Image
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143
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144 ###################
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145 # Prediction steps
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146 ###################
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147
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148 petpdflow!(x, Δx, y, Δy, v_known, theta_known, params.dual_flow) # Usual flow
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149
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150 if params.L_experiment
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151 @. oldx = x
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152 end
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153
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154 if params.prox_predict
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155 ∇₂!(Δy, x)
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156 @. y = (y + σ̃*Δy)/(1 + σ̃*(ρ̃+ρ/α))
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157 #@. cc = y + 1000000*σ̃*Δy
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158 #@. y = (y + σ̃*Δy)/(1 + σ̃*(ρ̃+ρ/α)) + (1 - 1/(1 + ρ̃*σ̃))*cc
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159 proj_norm₂₁ball!(y, α)
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160 end
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161
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162 ############
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163 # PDPS step
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164 ############
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165
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166 ∇₂ᵀ!(Δx, y) # primal step:
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167 @. x̄ = x # | save old x for over-relax
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168 petgrad!(r∇, x, b, c, S) # | Calculate gradient of fidelity term
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169
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170 @. x = x-(τ*λ)*r∇-τ*Δx # |
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171 proj_nonneg!(x) # | non-negativity constaint prox
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172 @. x̄ = 2*x - x̄ # over-relax: x̄ = 2x-x_old
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173 ∇₂!(Δy, x̄) # dual step:
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174 @. y = y + σ*Δy # |
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175 proj_norm₂₁ball!(y, α) # | prox
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176
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177 #####################
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178 # L update if needed
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179 #####################
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180 if params.L_experiment
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181 petgrad!(petgradx, x, b, c, S)
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182 petgrad!(oldpetgradx, oldx, b, c, S)
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183 if norm₂(x-oldx)>1e-12
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184 L = max(0.9*norm₂(petgradx - oldpetgradx)/norm₂(x-oldx),L)
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185 println("Step length parameters: L=$(L)")
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186 τ = τ₀/L
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187 σ = σ₀*(1-τ₀)/(R_K²*τ)
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188 end
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189 end
8
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190
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191 ################################
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192 # Give function value if needed
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193 ################################
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194
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195 v = verbose() do
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196 ∇₂!(Δy, x)
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197 value = λ*petvalue(x, b, c) + params.α*norm₂₁(Δy)
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198 value, x, [NaN, NaN], nothing
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199 end
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200
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201 v
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202 end
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203
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204 return x, y, v
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205 end
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206
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207 end # Module
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208
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209

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