src/PET/AlgorithmRotation.jl

Wed, 24 Apr 2024 16:54:38 +0300

author
Neil Dizon <neil.dizon@helsinki.fi>
date
Wed, 24 Apr 2024 16:54:38 +0300
changeset 29
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parent 26
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permissions
-rw-r--r--

added new plots and filmstrips

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1 ####################################################################
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2 # Predictive online PDPS for optical flow with known velocity field
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3 ####################################################################
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4
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5 __precompile__()
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6
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7 module AlgorithmRotation
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8
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9 identifier = "pdps_known_rotation"
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10
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11 using Printf
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12
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13 using AlgTools.Util
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14 import AlgTools.Iterate
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15 using ImageTools.Gradient
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16 using ImageTools.Translate
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17
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18 using ..Radon
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19 using ImageTransformations
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20 using Images, CoordinateTransformations, Rotations, OffsetArrays
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21 using ImageCore, Interpolations
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22
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23 using ..OpticalFlow: ImageSize,
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24 Image,
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25 petpdflow!,
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26 Rotation
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27
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28 #########################
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29 # Iterate initialisation
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30 #########################
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31
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32 function init_rest(x::Image)
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33 imdim=size(x)
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34 y = zeros(2, imdim...)
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35 Δx = copy(x)
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36 Δy = copy(y)
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37 x̄ = copy(x)
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38 radonx = copy(x)
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39 return x, y, Δx, Δy, x̄, radonx
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40 end
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41
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42 function init_iterates(xinit::Image)
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43 return init_rest(copy(xinit))
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44 end
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45
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46 function init_iterates(dim::ImageSize)
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47 return init_rest(zeros(dim...))
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48 end
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49
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50 #########################
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51 # PETscan related
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52 #########################
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53 function petvalue(x, b, c)
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54 tmp = similar(b)
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55 radon!(tmp, x)
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56 return sum(@. tmp - b*log(tmp+c))
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57 end
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58
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59 function petgrad!(res, x, b, c, S)
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60 tmp = similar(b)
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61 radon!(tmp, x)
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62 @. tmp = S .- b/(tmp+c)
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63 backproject!(res, S.*tmp)
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64 end
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65
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66 function proj_nonneg!(y)
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67 @inbounds @simd for i=1:length(y)
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68 if y[i] < 0
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69 y[i] = 0
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70 end
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71 end
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72 return y
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73 end
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74
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75 ############
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76 # Algorithm
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77 ############
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78
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79 function solve( :: Type{DisplacementT};
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80 dim :: ImageSize,
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81 iterate = AlgTools.simple_iterate,
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82 params::NamedTuple) where DisplacementT
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83
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84 ################################
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85 # Extract and set up parameters
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86 ################################
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87 α, ρ = params.α, params.ρ
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88 R_K² = ∇₂_norm₂₂_est²
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89 γ = 1
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90 L = params.L
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91 τ₀, σ₀ = params.τ₀, params.σ₀
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92 τ = τ₀/L
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93 σ = σ₀*(1-τ₀)/(R_K²*τ)
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94
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95 println("Step length parameters: τ=$(τ), σ=$(σ)")
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96
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97 λ = params.λ
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98 c = params.c*ones(params.radondims...)
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99
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100
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101 ######################
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102 # Initialise iterates
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103 ######################
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104
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105 x, y, Δx, Δy, x̄, r∇ = init_iterates(dim)
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106
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107 if params.L_experiment
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108 oldpetgradx = zeros(size(x)...)
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109 petgradx = zeros(size(x))
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110 oldx = ones(size(x))
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111 end
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112
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113 ####################
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114 # Run the algorithm
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115 ####################
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116
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117 v = iterate(params) do verbose :: Function,
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118 b :: Image, # noisy_sinogram
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119 v_known :: DisplacementT,
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120 theta_known :: DisplacementT,
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121 b_true :: Image,
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122 S :: Image
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123
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124 ###################
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125 # Prediction steps
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126 ###################
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127
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128 petpdflow!(x, Δx, y, Δy, v_known, theta_known, Rotation())
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129
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130 if params.L_experiment
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131 @. oldx = x
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132 end
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133
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134 ############
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135 # PDPS step
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136 ############
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137
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138 ∇₂ᵀ!(Δx, y) # primal step:
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139 @. x̄ = x # | save old x for over-relax
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140 petgrad!(r∇, x, b, c, S) # | Calculate gradient of fidelity term
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141
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142 @. x = x-(τ*λ)*r∇-τ*Δx # |
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143 proj_nonneg!(x) # | non-negativity constaint prox
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144 @. x̄ = 2x - x̄ # over-relax: x̄ = 2x-x_old
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145 ∇₂!(Δy, x̄) # dual step:
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146 @. y = y + σ*Δy # |
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147 proj_norm₂₁ball!(y, α) # | prox
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148
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149 #####################
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150 # L update if needed
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151 #####################
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152 if params.L_experiment
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153 petgrad!(petgradx, x, b, c, S)
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154 petgrad!(oldpetgradx, oldx, b, c, S)
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155 if norm₂(x-oldx)>1e-12
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156 L = max(0.9*norm₂(petgradx - oldpetgradx)/norm₂(x-oldx),L)
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157 println("Step length parameters: L=$(L)")
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158 τ = τ₀/L
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159 σ = σ₀*(1-τ₀)/(R_K²*τ)
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160 end
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161 end
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162
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163 ################################
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164 # Give function value if needed
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165 ################################
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166
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167 v = verbose() do
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168 ∇₂!(Δy, x)
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169 value = λ*petvalue(x, b, c) + params.α*norm₂₁(Δy)
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170 value, x, [NaN, NaN], nothing
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171 end
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172
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173 v
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174 end
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175
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176 return x, y, v
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177 end
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178
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179 end # Module
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181

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