Fri, 06 Dec 2019 21:19:21 +0200
Do not depend on Images, just ColorTypes
| 0 | 1 | ######################## |
| 2 | # Discretised gradients | |
| 3 | ######################## | |
| 4 | ||
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5 | __precompile__() |
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ab7d59b47140
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6 | |
| 0 | 7 | module Gradient |
| 8 | ||
| 9 | ############## | |
| 10 | # Our exports | |
| 11 | ############## | |
| 12 | ||
| 13 | export ∇₂!, ∇₂ᵀ!, ∇₂fold!, | |
| 14 | ∇₂_norm₂₂_est, ∇₂_norm₂₂_est², | |
| 15 | ∇₂_norm₂∞_est, ∇₂_norm₂∞_est², | |
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16 | ∇₂c!, ∇₂cfold!, |
| 0 | 17 | ∇₃!, ∇₃ᵀ!, |
| 18 | vec∇₃!, vec∇₃ᵀ! | |
| 19 | ||
| 20 | ################## | |
| 21 | # Helper routines | |
| 22 | ################## | |
| 23 | ||
| 24 | @inline function imfold₂′!(f_aa!, f_a0!, f_ab!, | |
| 25 | f_0a!, f_00!, f_0b!, | |
| 26 | f_ba!, f_b0!, f_bb!, | |
| 27 | n, m, state) | |
| 28 | # First row | |
| 29 | state = f_aa!(state, (1, 1)) | |
| 30 | for j = 2:m-1 | |
| 31 | state = f_a0!(state, (1, j)) | |
| 32 | end | |
| 33 | state = f_ab!(state, (1, m)) | |
| 34 | ||
| 35 | # Middle rows | |
| 36 | for i=2:n-1 | |
| 37 | state = f_0a!(state, (i, 1)) | |
| 38 | for j = 2:m-1 | |
| 39 | state = f_00!(state, (i, j)) | |
| 40 | end | |
| 41 | state = f_0b!(state, (i, m)) | |
| 42 | end | |
| 43 | ||
| 44 | # Last row | |
| 45 | state = f_ba!(state, (n, 1)) | |
| 46 | for j =2:m-1 | |
| 47 | state = f_b0!(state, (n, j)) | |
| 48 | end | |
| 49 | return f_bb!(state, (n, m)) | |
| 50 | end | |
| 51 | ||
| 52 | ######################### | |
| 53 | # 2D forward differences | |
| 54 | ######################### | |
| 55 | ||
| 56 | ∇₂_norm₂₂_est² = 8 | |
| 57 | ∇₂_norm₂₂_est = √∇₂_norm₂₂_est² | |
| 58 | ∇₂_norm₂∞_est² = 2 | |
| 59 | ∇₂_norm₂∞_est = √∇₂_norm₂∞_est² | |
| 60 | ||
| 61 | function ∇₂!(u₁, u₂, u) | |
| 62 | @. @views begin | |
| 63 | u₁[1:(end-1), :] = u[2:end, :] - u[1:(end-1), :] | |
| 64 | u₁[end, :, :] = 0 | |
| 65 | ||
| 66 | u₂[:, 1:(end-1)] = u[:, 2:end] - u[:, 1:(end-1)] | |
| 67 | u₂[:, end] = 0 | |
| 68 | end | |
| 69 | return u₁, u₂ | |
| 70 | end | |
| 71 | ||
| 72 | function ∇₂!(v, u) | |
| 73 | ∇₂!(@view(v[1, :, :]), @view(v[2, :, :]), u) | |
| 74 | end | |
| 75 | ||
| 76 | @inline function ∇₂fold!(f!::Function, u, state) | |
| 8 | 77 | @inline function g!(state, pt) |
| 0 | 78 | (i, j) = pt |
| 79 | g = @inbounds [u[i+1, j]-u[i, j], u[i, j+1]-u[i, j]] | |
| 80 | return f!(g, state, pt) | |
| 81 | end | |
| 8 | 82 | @inline function gr!(state, pt) |
| 0 | 83 | (i, j) = pt |
| 84 | g = @inbounds [u[i+1, j]-u[i, j], 0.0] | |
| 85 | return f!(g, state, pt) | |
| 86 | end | |
| 8 | 87 | @inline function gb!(state, pt) |
| 0 | 88 | (i, j) = pt |
| 89 | g = @inbounds [0.0, u[i, j+1]-u[i, j]] | |
| 90 | return f!(g, state, pt) | |
| 91 | end | |
| 8 | 92 | @inline function g0!(state, pt) |
| 0 | 93 | return f!([0.0, 0.0], state, pt) |
| 94 | end | |
| 95 | return imfold₂′!(g!, g!, gr!, | |
| 96 | g!, g!, gr!, | |
| 97 | gb!, gb!, g0!, | |
| 98 | size(u, 1), size(u, 2), state) | |
| 99 | end | |
| 100 | ||
| 101 | function ∇₂ᵀ!(v, v₁, v₂) | |
| 102 | @. @views begin | |
| 103 | v[2:(end-1), :] = v₁[1:(end-2), :] - v₁[2:(end-1), :] | |
| 104 | v[1, :] = -v₁[1, :] | |
| 105 | v[end, :] = v₁[end-1, :] | |
| 106 | ||
| 107 | v[:, 2:(end-1)] += v₂[:, 1:(end-2)] - v₂[:, 2:(end-1)] | |
| 108 | v[:, 1] += -v₂[:, 1] | |
| 109 | v[:, end] += v₂[:, end-1] | |
| 110 | end | |
| 111 | return v | |
| 112 | end | |
| 113 | ||
| 114 | function ∇₂ᵀ!(u, v) | |
| 115 | ∇₂ᵀ!(u, @view(v[1, :, :]), @view(v[2, :, :])) | |
| 116 | end | |
| 117 | ||
| 118 | ################################################## | |
| 119 | # 2D central differences (partial implementation) | |
| 120 | ################################################## | |
| 121 | ||
| 122 | function ∇₂c!(v, u) | |
| 123 | @. @views begin | |
| 124 | v[1, 2:(end-1), :] = (u[3:end, :] - u[1:(end-2), :])/2 | |
| 125 | v[1, end, :] = (u[end, :] - u[end-1, :])/2 | |
| 126 | v[1, 1, :] = (u[2, :] - u[1, :])/2 | |
| 127 | ||
| 128 | v[2, :, 2:(end-1)] = (u[:, 3:end] - u[:, 1:(end-2)])/2 | |
| 129 | v[2, :, end] = (u[:, end] - u[:, end-1])/2 | |
| 130 | v[2, :, 1] = (u[:, 2] - u[:, 1])/2 | |
| 131 | end | |
| 132 | end | |
| 133 | ||
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134 | @inline function ∇₂cfold!(f!::Function, u, state) |
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135 | n, m = size(u) |
| 8 | 136 | @inline function g!(state, pt) |
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137 | (i, j) = pt |
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138 | g = @inbounds [(u[i+1, j]-u[i-1, j])/2, (u[i, j+1]-u[i, j-1])/2] |
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139 | return f!(g, state, pt) |
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140 | end |
| 8 | 141 | @inline function gb!(state, pt) |
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142 | (i, j) = pt |
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143 | g = @inbounds [(u[min(i+1,n), j]-u[max(i-1,1), j])/2, |
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144 | (u[i, min(j+1,m)]-u[i, max(j-1,1)])/2] |
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145 | return f!(g, state, pt) |
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146 | end |
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147 | return imfold₂′!(gb!, gb!, gb!, |
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148 | gb!, g!, gb!, |
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149 | gb!, gb!, gb!, |
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150 | size(u, 1), size(u, 2), state) |
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151 | end |
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152 | |
| 0 | 153 | ######################### |
| 154 | # 3D forward differences | |
| 155 | ######################### | |
| 156 | ||
| 157 | function ∇₃!(u₁,u₂,u₃,u) | |
| 158 | @. @views begin | |
| 159 | u₁[1:(end-1), :, :] = u[2:end, :, :] - u[1:(end-1), :, :] | |
| 160 | u₁[end, :, :] = 0 | |
| 161 | ||
| 162 | u₂[:, 1:(end-1), :] = u[:, 2:end, :] - u[:, 1:(end-1), :] | |
| 163 | u₂[:, end, :] = 0 | |
| 164 | ||
| 165 | u₃[:, :, 1:(end-1)] = u[:, :, 2:end] - u[:, :, 1:(end-1)] | |
| 166 | u₃[:, :, end] = 0 | |
| 167 | end | |
| 168 | return u₁, u₂, u₃ | |
| 169 | end | |
| 170 | ||
| 171 | function ∇₃ᵀ!(v,v₁,v₂,v₃) | |
| 172 | @. @views begin | |
| 173 | v[2:(end-1), :, :] = v₁[1:(end-2), :, :] - v₁[2:(end-1), :, :] | |
| 174 | v[1, :, :] = -v₁[1, :, :] | |
| 175 | v[end, :, :] = v₁[end-1, :, :] | |
| 176 | ||
| 177 | v[:, 2:(end-1), :] += v₂[:, 1:(end-2), :] - v₂[:, 2:(end-1), :] | |
| 178 | v[:, 1, :] += -v₂[:, 1, :] | |
| 179 | v[:, end, :] += v₂[:, end-1, :] | |
| 180 | ||
| 181 | v[:, :, 2:(end-1)] += v₃[:, :, 1:(end-2)] - v₃[:, :, 2:(end-1)] | |
| 182 | v[:, :, 1] += -v₃[:, :, 1] | |
| 183 | v[:, :, end] += v₃[:, :, end-1] | |
| 184 | end | |
| 185 | return v | |
| 186 | end | |
| 187 | ||
| 188 | ########################################### | |
| 189 | # 3D forward differences for vector fields | |
| 190 | ########################################### | |
| 191 | ||
| 192 | function vec∇₃!(u₁,u₂,u₃,u) | |
| 193 | @. @views for j=1:size(u, 1) | |
| 194 | ∇₃!(u₁[j, :, :, :],u₂[j, :, :, :],u₃[j, :, :, :],u[j, :, :, :]) | |
| 195 | end | |
| 196 | return u₁, u₂, u₃ | |
| 197 | end | |
| 198 | ||
| 199 | function vec∇₃ᵀ!(u,v₁,v₂,v₃) | |
| 200 | @. @views for j=1:size(u, 1) | |
| 201 | ∇₃ᵀ!(u[j, :, :, :],v₁[j, :, :, :],v₂[j, :, :, :],v₃[j, :, :, :]) | |
| 202 | end | |
| 203 | return u | |
| 204 | end | |
| 205 | ||
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206 | ##################################################### |
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207 | # Precompilation hints to speed up compilation time |
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208 | # for projects depending on this package (hopefully). |
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209 | ###################################################### |
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210 | |
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211 | precompile(∇₂!, (Array{Float64,2}, Array{Float64,2}, Array{Float64,2})) |
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212 | precompile(∇₂!, (Array{Float64,3}, Array{Float64,2})) |
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213 | precompile(∇₂ᵀ!, (Array{Float64,2}, Array{Float64,2}, Array{Float64,2})) |
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214 | precompile(∇₂ᵀ!, (Array{Float64,2}, Array{Float64,3})) |
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215 | precompile(∇₂c!, (Array{Float64,3}, Array{Float64,2})) |
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216 | precompile(∇₃!, (Array{Float64,3}, Array{Float64,3}, Array{Float64,3},Array{Float64,3})) |
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217 | precompile(∇₃ᵀ!, (Array{Float64,3}, Array{Float64,3}, Array{Float64,3},Array{Float64,3})) |
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218 | precompile(vec∇₃!, (Array{Float64,4}, Array{Float64,4}, Array{Float64,4},Array{Float64,4})) |
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219 | precompile(vec∇₃ᵀ!, (Array{Float64,4}, Array{Float64,4}, Array{Float64,4},Array{Float64,4})) |
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220 | |
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221 | # The folding functions cannot be precompiled as theyre' meant to be (hopefully) |
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222 | # inlined in such a way that the parameter function also gets inlined withou our |
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223 | # code |
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224 | |
| 0 | 225 | end # Module |