src/VectorMath.jl

Wed, 15 Dec 2021 01:09:09 +0200

author
Tuomo Valkonen <tuomov@iki.fi>
date
Wed, 15 Dec 2021 01:09:09 +0200
changeset 36
6dfa8001eed2
parent 33
a60d2f12ef93
permissions
-rw-r--r--

Implement ZipArrays

33
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
diff changeset
1 ###########################
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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2 # Norms, projections, etc.
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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3 ###########################
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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4
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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5 __precompile__()
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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6
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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7 module VectorMath
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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8
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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9 ##############
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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10 # Our exports
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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11 ##############
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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12
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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13 export norm₁,
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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14 norm₂,
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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15 γnorm₂,
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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16 norm₂w,
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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17 norm₂²,
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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18 norm₂w²,
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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19 norm₂₁,
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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20 γnorm₂₁,
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Tuomo Valkonen <tuomov@iki.fi>
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21 dot,
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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22 mean,
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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23 proj_norm₂₁ball!,
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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24 proj_nonneg!
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Tuomo Valkonen <tuomov@iki.fi>
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25
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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26 ###########################
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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27 # Norms and inner products
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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28 ###########################
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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29
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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30 @inline function dot(x, y)
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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31 @assert(length(x)==length(y))
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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32
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
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33 accum=0
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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34 for i=1:length(y)
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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35 @inbounds accum += x[i]*y[i]
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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36 end
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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37 return accum
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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38 end
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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39
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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40 @inline function norm₂w²(y, w)
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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41 #Insane memory allocs
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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42 #return @inbounds sum(i -> y[i]*y[i]*w[i], 1:length(y))
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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43 accum=0
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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44 for i=1:length(y)
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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45 @inbounds accum=accum+y[i]*y[i]*w[i]
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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46 end
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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47 return accum
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Tuomo Valkonen <tuomov@iki.fi>
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48 end
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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49
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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50 @inline function norm₂w(y, w)
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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51 return √(norm₂w²(y, w))
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Tuomo Valkonen <tuomov@iki.fi>
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52 end
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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53
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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54 @inline function norm₂²(y)
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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55 #Insane memory allocs
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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56 #return @inbounds sum(i -> y[i]*y[i], 1:length(y))
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Tuomo Valkonen <tuomov@iki.fi>
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57 accum=0
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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58 for i=1:length(y)
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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59 @inbounds accum=accum+y[i]*y[i]
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Tuomo Valkonen <tuomov@iki.fi>
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60 end
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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61 return accum
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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62 end
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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63
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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64 @inline function norm₂(y)
a60d2f12ef93 Split FunctionalProgramming.jl, VectorMath.jl, and ThreadUtil.jl out of Util.jl.
Tuomo Valkonen <tuomov@iki.fi>
parents:
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65 return √(norm₂²(y))
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Tuomo Valkonen <tuomov@iki.fi>
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66 end
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Tuomo Valkonen <tuomov@iki.fi>
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67
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Tuomo Valkonen <tuomov@iki.fi>
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68 @inline function norm₁(y)
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Tuomo Valkonen <tuomov@iki.fi>
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69 accum=0
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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70 for i=1:length(y)
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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71 @inbounds accum=accum+abs(y[i])
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Tuomo Valkonen <tuomov@iki.fi>
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72 end
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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73 return accum
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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74 end
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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75
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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76 @inline function γnorm₂(y, γ)
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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77 hubersq = xsq -> begin
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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78 x=√xsq
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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79 return if x > γ
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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80 x-γ/2
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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81 elseif x<-γ
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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82 -x-γ/2
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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83 else
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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84 xsq/(2γ)
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85 end
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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86 end
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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87
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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88 if γ==0
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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89 return norm₂(y)
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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90 else
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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91 return hubersq(norm₂²(y))
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92 end
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Tuomo Valkonen <tuomov@iki.fi>
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93 end
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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94
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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95 function norm₂₁(y)
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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96 return reduce_first_slice((s, x) -> s+norm₂(x), y)
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97 end
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Tuomo Valkonen <tuomov@iki.fi>
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98
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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99 function γnorm₂₁(y,γ)
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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100 return reduce_first_slice((s, x) -> s+γnorm₂(x, γ), y)
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Tuomo Valkonen <tuomov@iki.fi>
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101 end
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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102
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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103 function mean(v)
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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104 return sum(v)/prod(size(v))
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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105 end
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Tuomo Valkonen <tuomov@iki.fi>
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106
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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107 ##############
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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108 # Projections
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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109 ##############
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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110
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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111 @inline function proj_norm₂₁ball!(y, α)
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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112 α²=α*α
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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113
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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114 if ndims(y)==3 && size(y, 1)==2
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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115 @inbounds for i=1:size(y, 2)
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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116 @simd for j=1:size(y, 3)
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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117 n² = y[1,i,j]*y[1,i,j]+y[2,i,j]*y[2,i,j]
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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118 if n²>α²
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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119 v = α/√n²
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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120 y[1, i, j] *= v
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Tuomo Valkonen <tuomov@iki.fi>
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121 y[2, i, j] *= v
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Tuomo Valkonen <tuomov@iki.fi>
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122 end
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Tuomo Valkonen <tuomov@iki.fi>
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123 end
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Tuomo Valkonen <tuomov@iki.fi>
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124 end
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Tuomo Valkonen <tuomov@iki.fi>
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125 else
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Tuomo Valkonen <tuomov@iki.fi>
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126 y′=reshape(y, (size(y, 1), prod(size(y)[2:end])))
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127
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Tuomo Valkonen <tuomov@iki.fi>
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128 @inbounds @simd for i=1:size(y′, 2)# in CartesianIndices(size(y)[2:end])
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Tuomo Valkonen <tuomov@iki.fi>
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129 n² = norm₂²(@view(y′[:, i]))
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130 if n²>α²
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131 @views y′[:, i] .*= (α/√n²)
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132 end
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Tuomo Valkonen <tuomov@iki.fi>
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133 end
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Tuomo Valkonen <tuomov@iki.fi>
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134 end
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Tuomo Valkonen <tuomov@iki.fi>
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135 end
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Tuomo Valkonen <tuomov@iki.fi>
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136
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Tuomo Valkonen <tuomov@iki.fi>
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137 @inline function proj_nonneg!(y)
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Tuomo Valkonen <tuomov@iki.fi>
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138 @inbounds @simd for i=1:length(y)
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Tuomo Valkonen <tuomov@iki.fi>
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139 if y[i] < 0
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Tuomo Valkonen <tuomov@iki.fi>
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140 y[i] = 0
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Tuomo Valkonen <tuomov@iki.fi>
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141 end
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Tuomo Valkonen <tuomov@iki.fi>
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142 end
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Tuomo Valkonen <tuomov@iki.fi>
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143 return y
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Tuomo Valkonen <tuomov@iki.fi>
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144 end
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Tuomo Valkonen <tuomov@iki.fi>
parents:
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145
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Tuomo Valkonen <tuomov@iki.fi>
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146 end # Module
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Tuomo Valkonen <tuomov@iki.fi>
parents:
diff changeset
147

mercurial